Wednesday, June 26, 2013
Push, pull and grin
Sunday, June 09, 2013
Bears in wolf clothing
Wednesday, March 27, 2013
Which came first: obese chicken or its obese microflora?
Good summary of a recently published paper on how our gut microflora influences metabolism of the entire organism. Most people tend to think of the gut simply as a container to periodically fill and empty. Only until recent years has science demonstrated that our gut is an organ actively involved in our entire physiology, including communication with the brain and immune system. In fact, just as our body fat is an endocrine organ, the gut is also involved in our endocrine system, including inflammation.
While we consciously or subconsciously interact with thousands of environment components on a daily basis, our gut contains another environment, the microflora, which interacts in ways we are unaware of. Part of that is comprised of what we swallow, sometimes microbes that hitch a ride on food we eat or drink. But that is why we have such a complex environment inside our gut. Hordes of 'good' bacteria often battle with 'bad' bacteria, and sometimes the latter may win. We usually become aware of those battle victories. Others are minor skirmishes that go unnoticed.
It is the chronic battles that alert the big army of our defenses, the immune system. And when the balance is continually upset, the rest of the body responds and other systems may malfunction.
Although epidemiological studies have suggested that some enteric bacteria are associated with obesity and chronic inflammation, the authors of this study demonstrated that a specific bacteria strain causes obesity. (Remember that association is not proof of causation.) However, a limitation of this study is the model: gnotobiotic (aka germ-free) mice. Regardless, it is a logical progression from in vitro models to study interactions of the gut microflora and metabolism. But we have more work to do on this.
My comments submitted on the website's post:
Gnotobiotic studies have their limitations despite that they are a logical progression from in vitro studies and isolate otherwise complex immune and intestinal interactions. Gnotobiotic animals typically have immune systems and intestinal walls that are under-developed. Also, all the food must be antigen free, which is difficult to achieve. Often, secondary infections can rapidly kill off an entire gnotobiotic colony or mask effects of controlled dietary variables. In our experience with gnotobiotic pigs (which are more relevant to human nutrition and gut microflora), administered probiotics had no effect on morbidity when challenged by a single-strain pathogen, whereas pigs in conventional state (non-gnotobiotic conditions) fared significantly better. Animals in a germ-free environment do not fully represent their counterparts in a conventional environment, and variables in studies with gnotobiotic animals must be strictly controlled (and are very expensive).
I found it interesting that in neither the paper or the supplementary information was provided the specific ingredients of the ‘WTP’ diet except for the major nutrient composition. ‘Chinese medicinal medicine’? ‘Prebiotics’? As a reviewer, I would have requested this information be more specific.
Wednesday, February 27, 2013
Academic Assholiness
A recent blog post, Academic assholes and the circle of niceness, on the Thesis Whisperer examines the increasing trend of academic snobbery, arrogance, and, aptly termed, 'assholiness'.
Some people ask me why I retired early from academia. Depending on the inquirer, my responses range from "It was just time to do so," to a rant on the trend of academic assholiness.
During the last nine years at a large self-inflated university that trend has increased, and, in fact, has been selected for, intentionally or not. After being recruited for a research position there, I was genuinely excited and passionate about my work. Over the next nine years of experience and observations in two departments, that dwindled to waking up every weekday morning and forcing myself to go through the motions. The last two years were simply a job while I prepared to walk away from the Academic Empire.
This is not the only university in which I have observed and experienced Academic Assholiness. Nor have I been close-mouthed about specific examples like many others that endure it and trudge on. My grievances were nodded at, checked off and ignored. I watched with anger as a research lab manager fought for her job with a lawsuit because a department head covertly attempted to have her fired. In this case, it was a prompted by an illness resulting from unhealthy environmental conditions in the department. This was an ongoing complaint by several staff and researchers over several years, but was repeatedly ignored.
Another example was a research scientist that continuously discriminated against gender and race of staff and graduate students in his laboratory. Grievances related to this individual were overtly ignored. Additionally, an academic scientist nearly destroyed the career of a young and brilliant scientist because of a personal dislike for her national affiliation and origin. And another scientist who intentionally recruited foreign graduate students to demand unreasonably long working hours, even threatening their educational and visa status if they complained. Then there's the junior scientist who feels that unrelenting humiliation of graduate and undergraduate students during their seminars or presentations elevates his own academic standing. And, lastly, the arrogant yelling at janitorial and service staff as if they were kicking a dog, or, mostly, their prevalent treatment of them as the Invisibles and Untouchables.
Finally, there is the Nobel Prize researchers recruited and installed in university departments at the expense -their research space and equipment- of other well-established and equally successful (without the NP recognition) academics, and whose snobbery and academic arrogance is overlooked and even smiled upon by university administration.
These are members of the increasing species of Academia assholiata that I see rapidly evolving in our social environment. I could continue with examples from 28 years in academic halls and three universities. Only one of these institutions, a small university, had a credible and effective process for grievances. The other two institutions had sham committees. Speaking openly meant being blacklisted. In the past four years I have seen too many young and bright scientists leave academia, and am now seeing a flood of older scientists flee, some jaded and bitter.I left last year without looking back.
I am heartened and pleased to see more public discourse like this post on these issues, and I encourage others in all levels of academia to be more outspoken.
Saturday, February 09, 2013
KcD Studios: senior thesis
A brilliant idea and wonderful artistic imaginative renditions. A great idea to incorporate into teaching chemistry!
Visit Kacie's website and blog to see more artistic renditions of the periodic elements.
Sunday, December 23, 2012
Treat obesity as physiology, not physics : Nature News & Comment
Treat obesity as physiology, not physics : Nature News & Comment
Friday, November 11, 2011
Precious Proteins
There I was; leading a small team of scientists to save these precious proteins for the world. For the future. Ice cream proteins. We had two of these rare proteins that expressed smooth, creamy, flavorful ice cream. And recovered another from an evil group of industrial men. It had been stolen from a collaborator; this one expressed rich butterscotch ice cream.
I had hidden these proteins in a house. But as the private industry group of men were surrounding us, I distributed the three precious proteins to three individuals in our small group (one looked like Albert Einstein). And told them to run. Run, hide; don't let ourselves, and the proteins be caught. Faint, punt, divert those bad men away from each of us. Don't listen to their pleas and lies.
We must preserve and keep these proteins safe. Safe for all to access in the future. Without modifications, without capitalization; free for all mankind. 'Run, and protect them with your lives.' For these are the keys to the Perfect Ice Cream. RUN!!!!
Then there was a small party outside, a gathering of friends to share food and music. Graeme playing guitar (I didn't think he had a music bone in his body), a girl with short blond hair and fine voice, and I thank John and Tracy for coming all the way from Indiana to play bass and share in the celebration. Of ice cream.
Full moon triggers wild and vivid dreams at night.
Tuesday, October 04, 2011
To mouse, or not to mouse. What is the question?
Sometimes, there is a 800-pound silverback gorilla in the room and he is 'invisible'. This article exposes the gorilla and shows that the problem animal is not the gorilla but in fact a big fat rodent! An often overlooked aspect of research studies using rodents is that these animals tend to be sedentary, mentally stagnant and overfed. This life style results in obesity and a range of consequent pathologies, including cardiovascular disease, cancer, diabetes, accelerated neurodegeneration and renal failure. This article details the fact that animals in such an unhealthy state do not qualify as appropriate research models for anything other than the study of 'couch potatoes'.
This is a major wake-up call for the research community and easily addressed by portioned feeding of laboratory rodents and by putting a running wheel in their cages.
Tuesday, June 21, 2011
Climate Changes: Interactive River Flow Map
Friday, May 20, 2011
Domestication Experiment with Silver Fox
The incredible fox domestication experiment in Novosibirsk, Russia from Tyler Cole on Vimeo.
You can read more about Cole's visit to Russia and the Institute by following this link.
An article about domestication of animals, in which the Novosibirsk foxes were featured, appeared in a recent issue National Geographic.
Saturday, April 16, 2011
The Zeitgeist Movement
Friday, February 18, 2011
Thursday, February 17, 2011
Are we there now?
Science is more than a body of knowledge; it is a way of thinking. I have a foreboding of an America in my children's or grandchildren's time -- when the United States is a service and information economy; when nearly all the key manufacturing industries have slipped away to other countries; when awesome technological powers are in the hands of a very few, and no one representing the public interest can even grasp the issues; when the people have lost the ability to set their own agendas or knowledgeably question those in authority; when, clutching our crystals and nervously consulting our horoscopes, our critical faculties in decline, unable to distinguish between what feels good and what's true, we slide, almost without noticing, back into superstition and darkness.
Wednesday, February 09, 2011
Pronghorn Declines in Texas
Pronghorn benefit a huge success; release set for late February
Thursday, February 03, 2011
Climate Change Cometh
The question that remains, and which may remain unanswerable, is the degree of human impact. At this point in time, the question may remain moot. The question requiring attention is how we can reduce our impact.
I know many weather and climate factors are the product of non-man based cycles. We cannot stop major long-run Global and Solar cycles, but the sudden changes we are seeing the last 50 years seem to be producing a lot more energy due to how quick the changes are occurring. (aka more instability)
However we do need to recognize that warming is a serious issue -- and one that Man likely cannot stop. But instead of trying to prepare and do what we can to slow it --- We are accelerating it now, and have a whole contingent of Americans that believe we should just ignore it --- which just seems foolish.
Man didn't cause all the European Glaciers to severely melt 4000 years ago. (see what's happened in Africa and the Middle East as all the Glacial-melt-fed Rivers dried up --- It's amazing to try to think of Iraq and Egypt as fertile plains, not dust-bowls.)
So we know climate change is a real threat regardless of Man -- but exacerbating it, certainly seems to be ignorant and foolish, just as much as thinking we can fully control it.
Tuesday, December 07, 2010
When immune systems run amok
Friday, August 07, 2009
Crosses
The tugging heart strings
the tickling sadness
the fleeting joy.
How do I quiet
the repressed longing
the remembered images
that play through my head.
How do I mediate
this battle raging inside
when I am both sides of the war.
This lake of unspoken confusion and emotions
damned by martyred morals
and past experience.
All threatening to overflow
with tidal waves.
Crushing you and I below.
Why does this have to be my cross to bear
Again.
I can't speak it
my voice is frozen.
Wednesday, August 01, 2007
Truth and Consequences
The truth that makes men free is for the most part the truth which men prefer not to hear.
- Herbert Agar
Wednesday, March 07, 2007
Loving Warriors We Are
"Some people mistake being loving for being a sap. Quite the contrary, the most loving people are often the most fierce and the most acutely armed for battle... for they care about preserving and protecting poetry, symphonic song, ideas, the elements, creatures, inventions, hopes and dreams, dances and holiness... those goodly endeavors that cannot be allowed to perish from this earth, else humanity itself would perish..."
- Clarissa Pinkola Estés, from The Dangerous Old Woman
Tuesday, January 23, 2007
Relativity is Very Special
I'm a 'conceptual physics lover', 'calculated fysiks hater'. I read 'Physics for Biologists' and the 'Tao of Physics'. But I hated my physics text book.
Physicists are obsessed for finding the 'Theory of Everything'. As if there was 'one' theory for anything. To me, physics is modeling for probabilities. Not to be confused with 'anything is possible.' But probabilities are what reality is made of, each having a different weight. Many theories in physics can be modeled by mathematics but not tested in the 'real world'. Nevertheless, sometimes that's all we have.
I have followed with the interest, curiosity and amusement of a physics novice the rapidly changinng theories of late: string, relativity, origins of the universe (and it's many components), and Farscape. Okay, the latter is more for entertainment.
So now we have physicists challenging Einstien's special theory of relativity with.........
very special theory of relativity [1].
Is it clear in color? Does it require a helmet? I bet it rides a magic bus.
Time for all us Observers to get on our Neutrinos and ride!
[1] Article in New Scientist (Jan. 20, 2007; vol. 193, No. 2587).
Letter by Andrew Cohen in Physical Review Letters (97, 021601; 2006).
Friday, December 29, 2006
Finally......
Eccentricity is not, as dull people would have us believe, a form of madness. It is often a kind of innocent pride, and the man of genius and the aristocrat are frequently regarded as eccentrics because genius and aristocrat are entirely unafraid of and uninfluenced by the opinions and vagaries of the crowd.
- Edith Sitwell
Wednesday, December 13, 2006
Now I have a direct circuit into my brain feeding me not only music
but podcasts (and podbooks, ohmygodno!). I still want a flash drive
for my brain......
I listened to a weekly update from SEED on the train this morning
which included the excerpt below. I know this topic has surfaced
before, so here's the 'latest':
Go In With a Bang
Athletes need energy. They need fire. They need power. They need, um,
spunk. And plenty of athletes hope to build their supply by abstaining
from sex for days, weeks or months before a big sporting event.
According to scientists, however, a little pre-gaming may not be such
a bad thing. Some studies indicate that sex may raise testosterone
levels and therefore actually help performance on the field.[3]
Italian professor of endocrinology Emmanuele A. Jannini says three
months of abstinence can cause testosterone to drop to children's
levels, which is probably none too helpful in maintaining the
aggression needed for boxing or football. Sexual activity also doesn't
leave participants drained of their vigor: A roll in the hay usually
only costs 25 to 50 calories per person [1], fewer than the calories
in a single Oreo cookie.
In women, sex produces a neuropeptide that can block pain for up to a
day, allowing female athletes to play through muscle pain[2]. So start
your warm-ups early, kids. Science knows best.
(source: National Geographic News)
[1] I disaggree with this assertion (energy expenditure per 'roll in
the hay'). I am devilishly curious about the sample pool from which
these data and statistics were derived. Obviously a pool of
conservative elderly........
[2] This reference to a gender dimorphic response is intriguing.
Parallel with my interest in that topic, I will see if I can track
down this information.
[3] A few recent studies coming out of the psychology field suggests
that not just any type of sex may have the same effects. Two recent
studies suggest that coitus induces a more robust physiological and
psychological response than either oral or masturbation. (one measured
ability to cope with acute environmental stress, the other examined a
few select hormones - which they had analyzed a greater selection)
(for quick summary of the latter: Fun with Brains. )
Recent literature also demonstrated that sex can mediate and moderate situational stress response for up to 24 hours after the sex act. That I don't find newsbreaking. We all know that sex raises endorphins and other 'feel good' hormones and neurotransmitters. It even relaxes muscles.
So women who claim to have headaches to abstain from sex can't use that as an excuse anymore. Sex can actually alleviate or dispel headaches.
Wednesday, September 13, 2006
Storms Within
Take me
Cauterize my bleeding heart
Cover my silence with your mouth
My breath is yours
Your taste is mine
As you lose yourself
Inside me.
Close
The gap
The chasm widens deeper
Always reaching
And pulling back
Afraid to give each other
Echoes of yesterday foul
Our todays.
Touching
Not embracing
Fear dictates the tempest
The emptiness inside us
Fleeting whispers
Tentative words
Storms reflected in
our eyes.
Thursday, July 27, 2006
My First Law
First Law: Where there's a positive, there is a negative.
Everything operates in systems; everything is a trade-off. My first law parallels one of the most basic laws of nature: the conservation of energy. It cannot be created or destroyed. It simply flows from one system to another in a variety of forms.
As British scientist and author C. P. Snow interprets the First Law of Thermodynamics [1]:
"You cannot win (that is, you cannot get something for nothing, because matter and energy are conserved)."This of course precludes its sibling, the Second Law of Thermodynamics, addressing the direction of that conservation. Again, in the words of Snow:
"You cannot break even (you cannot return to the same energy state, because there is always an increase in disorder; entropy always increases)."Natural proccesses that involve energy transfer go in one direction and that process is irreversible. Steven Hawking explains it thusly using time as an example: when time moves in a foward direction and one breaks a cup of coffee on the floor, no matter what happens, in our universe, one will never see the cup reform. Cups are breaking all the time, but never reforming.
Another parallel is Newton's Third Law of Motion: For every action, there is an equal and opposite reaction. Forces always involve interactions and they always come in pairs - equal and opposite action-reaction force pairs. Examples of this law abound in nature: the wings of a bird push air downwards. In turn, the air reacts by pushing the bird upwards.
Thus the Tao of physics, the yin and yang. Yet it is not a simple Descartian duality for which there is an invisible division. Opposites are always in motion, transitioning from one to the other; it is the complementation of natural proccesses.
The natural order requires complementation between the harmonious rule of order and a continuing respect for the fertility of chaos. Order needs to be at all times suppliant and responsive to fertile transition so that new order can emerge from the natural ferment of chaos.Our reality is a paradoxical complement of our subjective consciousness and the physical universe. That physical universe is itself a paradox of relativity and quantum uncertainty in which the future and the past become lost in probabilities. The description of physical reality is no more and no less than a narrative told about the stabilities and correspondences of our conscious experience.
Thus the philosophy that attempts to understand the fundamental nature of all reality, whether visible or invisible; it seeks a description so basic, so essentially simple, so all-inclusive that it applies to everything: metaphysics.
This is the First Law. It is the Tao.
Know Thine Enemy.....
No, I think we are all bozos on this bus of life [1].
“Imagine a universe in which your feelings, thoughts, and memories are not your enemy. They are your history brought into the current context, and your own history is not your enemy.”
- Steven Hayes, psychologist
[1] Referencing Firesign Theater's last (1971) 'early' production , I Think We Are All Bozos On This Bus. For the underlying meaning of the reference, visit this website for the CD liner notes, especially those written by Phil Austin.
Thursday, July 06, 2006
Who's Weird?
I never set out to be weird. It was always the other people who called me weird.
-- Frank Zappa, to The Baltimore Sun, October 12, 1986
Monday, June 19, 2006
Darwin's Challenge on Sex and Selection
Joan Roughgarden, a Stanford University biologist, challenges classical Darwinian sexual selection theory with her book Evolution's Rainbow and paper, "Reproductive social behavior: cooperative games to replace sexual selection," published last February in Science. She and co-authors propose an alternative model based on game theory to replace Darwin's Venus and Mars sexual selection theory. The classic model of men want sex and women want to cuddle pervades our culture and perhaps it dictates our biology and what we are without questioning if it is the only valid model.
But what about the prevalence of 'aberrant' sex? Horny women, bi- and homosexuality, and polygamy.....Oh my!! Unquestionably branded as aberrant sexual behavior in human culture, it is not uncommon in other species. The current issue of SEED lists 450 species, as a matter of fact. Raising various mammalian specimens myself (rats, mice, dogs, cat, sheep, horses, rabbits...) over a lifetime, I questioned the omnipotence of the classical sexual selection model based on observation of these species, including our own.
Roughgarden's paper expectantly caused a disturbance in the arena of biologists with a barrage of rebuttals and letters to the editor (see link below) and elsewhere. While Roughgarden proposes to replace Darwin's classical theory, perhaps expanding upon it would be more productive and reflective of the real world.
In a discussion appearing in SEED of Roughgarden's proposed model and the controversy*, author Jonah Lehrer aptly writes:
"Roughgarden's cataloging of sexual diversity has challenged a fundamental biological theory. If Darwinian sexual selection -whatever its current variant- —is to survive, it must adapt to this new data and come up with convincing explanations for why a host of animals just aren't like peacocks."Time for all biologists to step outside their box for a moment and consider Roughgarden's points.
* The Gay Animal Kingdom, online article and in the June/July 2006 printed issue.
Abstract for Roughgarden et. al. paper and listing of published rebuttals in Science .
Friday, June 16, 2006
Science Idol: the Scientific Integrity Editorial Cartoon Contest
The Union of Concerned Scientists (UCS) birthed a brainstorm for a contest to speak out. Using satire in the form of cartoons, contestants are invited to take meaningful pot shots at the current US administration's track record on science. Aptly named "Science Idol", contestants can make fun of the administration's attempts at control and distortion of science.
Two categories allow amateur and professional cartoonists to submit their entries which are due by July 31, 2006. Twelve finalists will be selected by celebrity judges and these will be judged by the public for the winners.
For more information on entries and prizes, visit the UCS website.
I hope Gahan Wilson submits an entry.
Sunday, May 28, 2006
Blog cloning
My problem is I can't type fast enough or access to a medium is unavailable when needed the most. I am waiting for technology to develop a flash drive that can be inserted directly into the brain and to which I can download my thoughts, remove later and upload to my computer. Reading the weekly science and technology news, that may happen soon; I'll be the first to volunteer testing a prototype.
The experiment simultaneously succeeded and backfired. Writer's block is gone and my writing expression has evolved and blossomed. I've published several works since then, even delving into other genres under a pseudonym (don't ask; I'm not telling). Unfortunately deadlines continue to hover over me and I'm just as much a procrastinator as before. The two books I am working on still progress at a snail's pace.
My passion is life, although what you mostly read here in these two blogs are two special passions: science and riding motorcycles. In some ways the two are similar: journeys into the unknown. Both science and riding involve destinations, technology and processes. Yet a component of both many don’t consider is the journey; the journey of discovery. That is an important common denominator and a recurring feature that winds its way in and around these blog posts. (Did the word ‘cloning’ in the title give you a clue?)
Because the motorcycle posts have become more frequent, I decided to devote a new blog site to them: Meanderings on Two Wheels. Over time I will be moving the bike and riding content from the original blog site (Whose Reality is This?) to the newer bike site. I will leave some of the original bike posts where they were originally posted, but not all. As I move them I will post an update in the bike site. Otherwise they will be hidden in the archives. If any code monkeys out there know how I can add a function to a side bar for recently added posts independently from the date, help would be appreciated. Until then, watch for notices of posts moved from this site.
Recently moved:
My Zen of Motorcycle Riding
Walkabout
April's Fool Day
* Short story by the same name by science fiction and commentator Harlan Ellison. Be forewarned if you read this story; it is highly emotive and powerful. It may birth nightmares.
Thursday, May 25, 2006
If I Were Head of State: Due Parte
Friday, May 19, 2006
Snot Rockets
A major obstacle is my allergy to grass pollen. Those tiny misshaped granules that help procreate the many species of grasses wreck havoc on my immune system. The little mast cells that are the soldiers in the first line of defence in the mucus membranes bombard my nose, eyes and skin with histamine, setting off a cascade of mucus production.
"Attack!!!!"
Membrane cells secrete that viscous sticky stuff called 'mucus', chock full of proteoglycans, salts and enzymes that trap and degrade small foreign particles and agents as a protective mechanism. Yet, a hypersensivity to certain allergens such as grass pollen can elicit mucus production like no tomorrow and the nose becomes a running faucet. In that instance, it becomes less of a friendly 'protective' evolutionary function and more a nuisance and downright pain in the nose. It rightly earns the name: 'snot'.
This leads to the question: What does one do when he/she encounters an attack on all fronts by enemy allergens and the battle wages to the point where you can't keep up with the mucus production by snuffling it back up your sinuses?
Well, the old remedy that all outdoorsy people are familiar with: the 'snot rocket'.
Just aim well.
I read the following this morning in my recent issue of New Scientist in the section: The Last Word, where readers submit questions which are answered by other readers. Here it was; the 'snot rocket'.
Is it coincidence a human finger fits exactly into a human nostril. If not, why does my mum tell me not to do it?Note: I recall commenting to a close friend once "You know how close and trusting we are when I can pick the buggers from your nose." Better all out of the nose than half out........
Your mother may not approve, but there is a way to clear your nose without sticking anything inside it. It's called the "snot rocket". Just push against the side of one nostril to close it off, take a deep breath, close your mouth and exhale as hard and sharply as you can through your other nostril. You'll be amazed how fast the contents shoot out. Just make sure you tilt your head away from your body to avoid peppering yourself. Nose-clearing tactics like the snot rocket mean there is no life-or-death reason for the co-evolution of digging digits and large, inviting nostrils. After all, nose blockage is easily managed by breathing through your mouth. In fact, a blocked nose is really only a problem if something gets lodged near your nasal bones, where it is dangerously close to your brain. That is a region where human fingers are too podgy to be of any use. A rather thrilling story of a primatologist, some tweezers and an engorged Ugandan tick comes to mind.
Sexual selection might have favoured the relationship of finger to nostril if, say, females in the Pleistocene preferred mating with males who picked their noses, or if males and females picked each other's noses in a courtship ritual. However, that would be taking reciprocal grooming a little far.
So we must conclude that, yes, it is mere coincidence that your fingers fit so nicely into your nostrils. I doubt the made-for-each-other argument is going to change your mum's opinion of rhinotillexomania. I suggest you demonstrate the snot rocket instead and see what she says.
Holly Dunsworth, State College, Pennsylvania, US
...and A View to the Sky
A meteor shower is expected to be seen between May 19 and June 19 of this year as Earth passes through the edges of the comet's tail. The largest and brightest fragment (called Fragment C), and thought to be the main bulk of the comet, may be visible to the naked eye in dark skies. Fragment B, the next brightest comet fragment, may require binoculars.
You can read more about the history of and expected passing of Comet 73P's remains at the Comet Chasers website.
Wow, what a treat: a recent full moon and now comets!
Wednesday, May 10, 2006
View From the Table
A bookstore-aholic, I often find solace in the bookstores amongst the book and magazine racks and the cafes. Once inside, like a lion scoping its prey, my focus is automatic and efficient, stratigically directed to those areas of the store that give me instant gratification. Gods forbid anyone who is in my way.
I head first to the science magazine section and peruse my favored magazines, New Scientist, SEED and American Scientist. Scanning the covers, one or two seem to magically appear in one hand before I move on. The first two are unquestionably worth perusing, even though I subscribe to the first. Odd that; the current issue adorns the store racks sometimes days before mine arrives in my departmental mail box.
Next, on to the motorcycle magazines. This is a hunting activity for they are rarely grouped by category of bikes or riding. Considering the variety of publication releases, from monthly, bimonthly to quarterly, finding good reading material has become a game of hide-and-seek and "What's on the stand today?" or "Where the hell is it now?". This time, I chose a British bike rag on the advice of a fellow adventure rider:
"If you really want to learn about the bike world, read the European rags. Bikes and riding are a way of life there. Here, bikes are recreation and show."
He's right. The real 'meat' of riding motorcycles is in Europe and Asia. Bikes and scooters are often the sole transportation of many people there. Riding for sport and pleasure is a close second. It's a very different perspective and grasp of being mobile there. It makes me wish I could live and move amongst them.
After plucking one, two motocycle magazines, I turn on my heel and head out of the magazine racks, glancing at the woodworking and homebuilding rags. Ah, the latest issue of Fine Homebuilding. Instantly plucking that issue, I round the corner and head into the cafe. Nodding a "Hello" at the clerk behind the counter and finding a table near the windows, I stack the magazines in the order of interest for the evening: homebuilding at the bottom, two science rags, a Texas riding issue, and the British bike rag on top. After spending an entire day entrenched in science, including reading papers on the train home, I crave a brief respite.
Returning to my table with a sandwich and a tall ice tea, I eat slowly and look around me. Two tables are occupied by women: two girls of college freshman age at one, two middle-aged women at the other. The two younger girls are chit chatting, leafing through celebrity rags with pictures of glamor men and women adorning the slick colored pages. They appear to be critiquing them judging from their fingers pointing at the figures on pages. I reminds me of the plastic paper people with stick-on and take-off clothes that kids play with.
The two older women are reading Cosmos, Home Journal and Good Housekeeping. Pages filled with "How to lose that fat butt in 6 days" or "How to keep the sex alive in your marriage", interspersed with magical decorations for home, husband and family. Here, cut this out and hang it on your wall and your life will be fulfilled and happy. All this interspersed with an hour-long discussion on what color to paint the dining room, who to hire to mow the lawn, and "Oh, by the way, did you hear about Isabel......"
I can't help but notice that I'm shaking my head, not understanding how such things can captivate their attention and time and grateful that my life is empty of similar occupations that could be better utilized contemplating Stephen Hawking's recent proclamation of multi-universes and reality existing in the eye's of the beholder. Or the many roads I want to travel on my bike.
I look down at my own table and I see magazines that reflect a very different pool of interest and past time than these other women. And I wonder how I ended up so different from others of my own gender. Yet quite satisfied with who I am.
In the line to pay, an older black man behind me strikes up a conversation:
"You know, in a moment, this moment will be gone. Forever gone."
After a moment's thought, I reply "Yes, but then there will be a new moment to replace the one that is gone."
[nodding] Mmhmm.... That is right. And then another moment will replace that one, too."
"Yes, and then another and another. And all those moments replaced will be memories."
"Yessah, and some of those memories may stay, some may be lost. "
"Very true. >And new ones will appear to replace those lost."
"Mmmhmm. Now I wonder if you will remember this conversation after several moments."
Smiling broadly, I reply, "Yes, sir. I will remember this conversation in several moments and for many more after that. And remember this: 'No matter where you go, there you are'."
"Hmm... yes, I like that. Well, young lady, you have a good evening. Yes, I like that...."
Now where else can you go and talk metaphysics to strangers but in a bookstore?
Monday, May 01, 2006
Battles
"When a shepherd goes to kill a wolf, and takes his dog to see the sport, he should take care to avoid mistakes. The dog has certain relationships to the wolf the shepherd may have forgotten."- Robert Pirsig, Zen and the Art of Motorcycle Maintenance
Thursday, April 27, 2006
We Are All Monkeys
One of the most brilliant media commentaries on just who we really are: The Monkeys
..... are us.
"Attention! There are monkey boys in the facility!!"
(anyone know this movie reference? )
Tuesday, April 25, 2006
In the Age of Politically Correct
I watched with trepidation this Age blossom and pollinate over the last twenty-plus years. Now its seeds are growing all over the world. In several places, it has become a noxious weed.
“The pattern goes like this. Tony Blair says that we have to meet the extremist threat by 'championing our values of freedom, tolerance and respect for others'. Then his ministers announce new plans to criminalise 'indirect incitement' of terrorism, along with tougher proposals to outlaw 'incitement to religious hatred'.
The government must have a different dictionary than I do. Mine defines tolerance as 'broad-mindedness' or 'permitting free expression of views one does not share'. In the Whitehall Newspeak edition, however, tolerance appears to mean the opposite. In order to defend our tolerant society we apparently have to ban views that most people do not share. Welcome to the age of intolerant tolerance.”
“We need to tolerate the 'free expression of views one does not share', in order that we can sort out the truth in the open, instead of trying to bury difficult issues beneath a pile of bans. Let everybody freely express their views - and let us all have the freedom ruthlessly to question, criticise and interrogate everything that is said, about everything from religion to race, from suicide bombings to British values. Now more than ever we need freedom of speech for a frank and 'broad-minded' debate about the sort of society we live in and where it is heading.”
Reiterating a quote from Voltaire:
“'Think for yourselves, and let others enjoy the privilege of doing so too.”
If I were Head of State.......
- Everyone would be permitted to voice their opinions. That’s what they are: opinions. If they offend you, debate them intelligently, learn to filter them, or pull your head into your shell.
- Everyone will have the right to make wrong decisions. Learn from the consequences. Or be eliminated from the gene pool.
- Everyone is not created equal. We are not clones. Deal with it.
- There will be more than two political parties. There are more than two ideologies; let’s have better representation.
- All science funding will be deposited into a central fund and disseminated based upon merit, not on sexy biotechnology. The Good Ole’ Boy’s Club will be replaced by representatives from qualifying committees and societies.
- Science journal impact factors will be negative numbers only.
- Birth control will be distributed free and without discrimination.
- A Stupidity Test will be a mandatory component of marriage licenses. Applicants that fail will be required to complete a high school diploma and classes in “How to Be a Functioning and Responsible Human Being” before reapplying.
- A requirement of living with a potential spouse for two years must be satisfactorily fulfilled before applying for a marriage license. Applicants must also prove an established household income.
- Separation between religion and state will be strictly enforced. There is no debate.
- I reserve the right to add more to this list.
Monday, April 24, 2006
Natural
Removing my helmet, I told my friend Chris that I find more and more as I ride that I don't want to get off. His smiling eyes and face reflected a knowing understanding.
While reading* on the train this morning, I came across a passage that explains it all:
"Being on the machine seems more natural than being off it."
Zen and the Art of Motorcycle Maintenance, by Robert Persig.
Thursday, April 20, 2006
Ghost Riders in the Sky
Nothing is as impressive and electrifying as, well, a
I awoke in the middle of the night to a strong palpable smell of moisture and earth in the air. Arising from bed I watched lightening dance between the blue-black clouds in the northwest horizon. The still air and the haunting contrast of darkness blanketing the ground with the subtle flickering of light in the clouds presented a surreal world around me. Silence betrayed the distance of the storm and I returned to my slumber.
I was awoken again later in the night by a furtive wind, sneaking through the open windows and rustling the curtains. Lying in bed I pondered if my guest was an edge of the storm passing by or a harbinger of elemental fury. As if deliberately answering my questions, sudden gusts of wind shook the house and whipped through the windows. Anything light enough in the house and in the wind’s path scattered the floor like fallen soldiers beset by an army of omnipotent invisible beings.
Jumping from my warm bed, I was greeted by relentless and imbricating lightening and thunder, the light flashing all around me like strobe lights. Streaks of lightening seared through my vision, superimposed on the ground and the sky as if they were umbilical cords. I struggled against the wind to close the windows in the direct line of assault, leaving the opposite windows open to delight in the elemental fury upon me.
Standing in the middle of the house with the onslaught and fury of wind, rain, thunder and lightening surrounding me, electricity crept up my body, my skin tingled, my heart pounded harder with every close clap of thunder. Lightening strikes were close enough to deliver a luminance brighter than daylight albeit in a fraction of time and space. I felt like an immortal in a vortex of Nature’s chaos as the elements engulfed my senses.
As quickly as it descended, the storm passed me by. A gentle cleansing rain was left behind to clear the air and quiet the senses and heart. With a rhythmic and soft pattering on the windows and roof, I returned to a deep sleep and dreams.
Sure enough, Nature’s wild horses left me a reminder of their presence in the morning. I suspected during the night several strikes of lightening were close. Sure enough, the circuit board in my truck was blown.
Ah well. Horses leave behind roadside apples. Wild horses riding on the storm can leave behind mementos, too. Shit happens.
Wednesday, April 19, 2006
Buttology
What's next? Penisology? Hmm......
Rear Admirable
David Holmes, a psychologist at Manchester Metropolitan University, insists that a good bum is key to attractiveness, and he's devised a formula that describes the ideal female buttocks. According to Holmes, maximizing (S + C) x (B + F)/T - V makes for gluteal greatness. S is overall shape of the bottom, C is circularity (how spherical the butt is), B is resilience to bouncing and wobbling, F is touch firmness, T is skin texture and V is the vertical ratio or "pertness." Holmes added that a hip to waist ratio—waist size divided by hip size—of 0.7 is ideal for framing a woman's posterior.
Holmes found the formula by getting 2,000 British women to rate their own bottoms. In the shape category, those with a "trodden doughnut" got only one point, whereas those with a "small peach" scored the maximum five points. After compiling all the factors, a total of 80 points was labeled "perfection," whereas booties earning fewer than zero points were told to "stay indoors." But don't fear, saggy bottom girls, Holmes writes, "Failing all else, confidence and good conversation can sometimes distract attention, if not compensate for a 'bum deal' in the buttock lottery."
"Borrowed" from online Seed Magazine, New and NotableThe Honesty Meme
A brief converstaion between Pirsig's son, Chris, and he:
"Dad?"
"What?"
"What should I be when I grow up?"
I don't know what to say. "Honest," I finally say.
I recall asking my father the same question. I clearly remember his response:
"Whatever you want to do, whatever you want to be. But always be honest to yourself and to others."
I've tried hard to do just that, Dad. I've changed my mind a few times, but at least I'm honest about that.
If my daughter reads this, I want to tell her the same: always be honest with yourself and with others. And follow the path that has heart.
Tuesday, April 18, 2006
"Paranoia strikes deep.......
A flashback from the '60's. Yet history has a nasty habit of repeating itself.
The event of 911 evoked a rekindling of community, cooperation, altruism and cohesiveness amongst not only a city but a nation. It even expanded globally.
For a short time.
Then we 'reacted'. Since then, our country has degenerated into a nation of paranoia and fear in the guise of 'patriotism' and 'right'. Without an honest definition of each. In essence, the terrorists were successful. Look around you; read the papers, watch television, watch and talk to people. We are all afraid of ghosts. Mostly our own.
I mourn what we have lost, what we have become and what we could be.
The following is a small example that trickles down like acid rain on marble:
As a researcher in the medical field, disposable sterile scalpels are used in our labs for grossing tissues. I called to order a box of disposable scalpels from one of the largest scientific vendors in the country that has supplied most of the medical research and hospital labs here for years. Their reputation is impeccable.
I was informed that they were suddenly prohibited from shipping disposable scalpels by the federal government. They were waiting for 'approval' and I was encouraged to call back in 7-10 days. Two weeks later when I called to place the order, I was informed that the responsible federal bureau still had not released an 'approval' to ship disposable scalpels. With detectable frustration and apologies, they could offer no prediction of when that approval would be forthcoming.
I called another vendor that sells and ships medical supplies and was greeted with the same scenario.
We have become a nation of fear. We are afraid of ourselves.
We see ghosts and they don't even know they are ghosts.
Mad Scientists and Coffee
Tangenting into predictions of what life form will exist the longest on this planet, I posited that microbes will sit in their little habitats giggling at the extinction of the Big Two-appendaged Macrobes. Face it: humans are built 'wrong'. We don't excel at anything, but we are good, albeit slow, adaptionists. Regardless, we can't mutate fast enough to our own self-induced evolving habitat. Nor do we seem capable of seeing that we are destroying everything that gives us life on this planet. Perhaps our species will succumb to the same basic premise of habitat overpopulation dynamics and we will eat each other and die from kuru like the deer (anyone remember the movie Soylent Green?)
Contemplating the ultimate cure for all pathogenic illnesses, we narrowed it down to mucus membranes. Most pathogens gain passive entry into our body via our mucus membranes: our gut, mouth and nose. It provides moisture, nutrients, and an ideal cradle to multiply. Thus, we posited, if we don't eat, drink or breathe, we won't have to worry about getting sick! It is logical.
However, like good scientists, we need to test the hypothesis. We need more data. Our methodology is simple and falls within a NIH budget: duct tape. Now getting it beyond the ethics committee may be a problem.
Ah, the challenges of being a scientist......
Saturday, April 15, 2006
My Zen of Motorcycle Riding
Horses have names, so does my bike: Red (Red Sonja). Just as every horse has the same basic anatomy, and motorcycles share similar mechanical concepts (power system, function, etc), they all express an individual personality. Red and I are becoming well acquainted; I learn something new about it and myself every time I ride. We both have personalities and I am still learning to mesh mine with Red’s. Every time I add or change something on Red, we go through another meshing.
I posed a question to an online motorcycle group on which I participate and it generated slight confusion. I received answers that created more questions, and even more answers. But that’s the process of learning about anything. Rather than knowing only the effect, I want to learn the cause(s) as well. Invariably, peeling away one component reveals another, and on and on until a system is pieced together. In reality, there is usually more than just one answer, more than one way to go from point A to B.
My question to the group was: how does wind affect gas mileage? Realizing that it was a complex question and there would be several answers, sure enough many factors affect gas mileage. The style in which one rides, the intrinsic components of the bike (engine, transmission, power, fairings, etc), and environmental elements. I targeted one element: how does altitude affect engine performance? Of course, what I was asking was a physics-based question (ultimately everything is reduced to physics). So I learned about air density, humidity, temperature, fuel ratios and altitude.
Being aware of all of these components when you ride allows you to feel all of it in synchrony: the wind, temperature, altitude, fuel combustion, speed, road surface, and so much more. But rather than be overwhelming, it all becomes a part of you and your bike together. Does it detract from the beauty and enjoyment of riding a bike? Only if you let it. On the contrary, it can enhance the sensation and pleasure of riding. Your bike becomes more a part of you and you a part of your bike.
It is my ‘zen’ of riding.
Thursday, April 13, 2006
Walkabout
You see things vacationing on a motorcycle in a way that is completely different from any other. In a car you're always in a compartment, and because you're used to it you don't realize that through that car window everything you see is just more TV. You're a passive observer and it is all moving by you boringly in a frame…… On a cycle the frame is gone. You are completely in contact with it all. You are ‘in’ the scene, not just watching it anymore, and the sense of presence is overwhelming.
Metaphorically our lives become like the compartment of a car: the passive observer, too busy to talk to each other, passing life by outside without really touching it, experiencing it. By the time we stop to look back and wonder where it went, it’s too late. This is a dead end.
The Australian adolescent aborigines (and many other indigenous peoples) go walkabout for weeks or months as a rite of passage. I often refer to go walkabout when I travel without a planned itinerary or even destination. It is all about the journey, not the destination.
* Zen and the Art of Motorcycle Maintenance. By Robert Pirsig.
Thursday, April 06, 2006
Mounting Evidence for the Noodly Appendage of Flying Spaghetti Monster
Are these ancient noodles the ancestors of our modern noodles? The biological composition of the 4,000-year-old noodles suggests that modern noodles evolved over time and perhaps
Doubters may refer to their popular Belief-o-matic for consultation on their Belief du Jour in this matter.
Tuesday, April 04, 2006
Miss Information
Information.
DNA information is transmitted through RNA, transferred to ..........proteins......cell signaling.....adaptation..... on and on. Read a paper, watch TV, bombardment by your fellow Infomation Perpetuators; we are all information carriers and transmitters. Some should be eliminated from the Information Pool.
There are many genres and species of Information. Even genders.
In today's world of modern technology and its ability to rapidly propagate, we have a skewed gender population of Infomation: Miss Information.
When Miss Information rolls down hill, she balloons, sprays everywhere and the repercussions extend exponentially.
Here is a critique of Miss Information dressed innocently as 'education.'
"How stuff doesn't work"
Pharyngula, the mind of PZ Myers.
Saturday, April 01, 2006
April's Fool Day
I woke up this morning with a warm naked body next.....
Oh wait, that was a dream.
Got out of bed greeted by humid warm air blowing through all the window curtains, chirping birds outside the windows, the smell of moist Texas air. The sun hiding above the laden fog and clouds with a hint of later sunshine and heat. Wear a tank top under the jacket today; it's going to be a humid toaster.
The smell of freshly made coffee mixes with the moist breeze in the house and I see my horse outside grazing, stark black against the blended green and brown terrain. The barn roof drips condensation which the ground absorbs quickly. The cows next door meander contentedly.
After throwing water on my face and donning top and pants, I gather a change of clothes, shampoo and toothpaste, top my thermal mug with coffee, and pack the laptop accessories into the padded backpack. We've got miles and miles and days away ahead of us.
Grab the keys on the way out the door and greet the silver FJR waiting outside under cover like a trusty steed waiting for its master. Checking it over, stuffing the hardbags, and strapping the backpack onto the back rack, my leg swings over to straddle the seat. Sitting down in that comfortable sheepkin-cushioned saddle, shift into neutral, turn the key and push the start button. The sound that makes you go hummmmm.....
Sit for a while enjoying the peace and quiet while the Silverado between my legs warms to a purring idle. Smiling, the jacket is zipped up, the helmet is on and strapped, gloves envelope my hands and we ready to roll. Right the bike, push up the kickstand, shift down and roll the throttle. We're off.
Taking the country road curves slowly this morning, making our way to the highway heading south. Got a long day with ribbons of road ahead. No need to push it until the urge arises to crank the throttle open for a gazelle-like sprint. No cars in sight, no lights, no horns. Only the open road ahead and behind, going somewhere through space and time. Right now, there's only me and my steed. And right now, that's all that I need.
April Fool's Day and wishful thinking.
For those who can, have a good safe ride today.